Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IB64_RS03710 | Not Available | Positive | 894282 - 894794 | 19561.3 |
| toxin-antitoxin system ywqk family antitoxin | IB64_RS03715 | Not Available | Positive | 894919 - 895881 | 37120.3 |
| duf5991 domain-containing protein | IB64_RS03720 | Not Available | Positive | 895953 - 897098 | 43590.9 |
| rna polymerase sigma factor | IB64_RS03725 | Not Available | Positive | 897289 - 897774 | 19164.8 |
| hypothetical protein | IB64_RS03730 | Not Available | Positive | 897781 - 898377 | 23200.7 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | IB64_RS03735 | Not Available | Negative | 898655 - 901120 | 91860.5 |
| pyridoxamine 5'-phosphate oxidase family protein | IB64_RS03740 | Not Available | Positive | 901227 - 901700 | 18070.8 |
| cysteine synthase a | IB64_RS03745 | Not Available | Negative | 901804 - 902751 | 32912.8 |
| alpha/beta hydrolase | IB64_RS03750 | Not Available | Negative | 902896 - 903708 | 30070.2 |
| duf4932 domain-containing protein | IB64_RS03755 | Not Available | Positive | 903882 - 905267 | 52901.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



