Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | IB64_RS23030 | Not Available | Negative | 5357757 - 5359643 | 71574.1 |
| tonb-dependent receptor | IB64_RS23035 | Not Available | Negative | 5359673 - 5363125 | 128338.0 |
| fecr family protein | IB64_RS23040 | Not Available | Negative | 5363254 - 5364453 | 45326.9 |
| rna polymerase sigma factor | IB64_RS23045 | Not Available | Negative | 5364553 - 5365131 | 22764.8 |
| chorismate synthase | IB64_RS23050 | Not Available | Positive | 5365392 - 5366468 | 39234.8 |
| dipeptidase | IB64_RS23055 | Not Available | Positive | 5366481 - 5367845 | 50381.6 |
| linear amide c-n hydrolase | IB64_RS23060 | Not Available | Negative | 5367953 - 5368987 | 38504.7 |
| bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | IB64_RS23065 | Not Available | Negative | 5369073 - 5372504 | 128952.0 |
| duf4396 domain-containing protein | IB64_RS23075 | Not Available | Negative | 5372750 - 5373472 | 27332.4 |
| dna topoisomerase 3 | IB64_RS23080 | Not Available | Negative | 5373562 - 5375712 | 81055.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



