Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | IB64_RS22525 | Not Available | Positive | 5236512 - 5236865 | 13416.9 |
| imma/irre family metallo-endopeptidase | IB64_RS22530 | Not Available | Positive | 5236852 - 5237589 | 27849.7 |
| hypothetical protein | IB64_RS22535 | Not Available | Positive | 5237552 - 5238076 | 20536.8 |
| holliday junction branch migration protein ruva | IB64_RS22540 | Not Available | Negative | 5238213 - 5238815 | 21173.1 |
| diaminopimelate dehydrogenase | IB64_RS22545 | Not Available | Positive | 5238974 - 5239873 | 32315.2 |
| paqr family membrane homeostasis protein trha | IB64_RS22550 | Not Available | Positive | 5240001 - 5240651 | 23666.2 |
| anaerobic ribonucleoside triphosphate reductase | IB64_RS22555 | Not Available | Positive | 5240991 - 5243384 | 90307.7 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | IB64_RS22560 | Not Available | Positive | 5243392 - 5243856 | 17564.8 |
| mfs transporter | IB64_RS22565 | Not Available | Positive | 5244092 - 5245498 | 50124.1 |
| 2-aminoethylphosphonate--pyruvate transaminase | IB64_RS22570 | Not Available | Negative | 5245506 - 5246594 | 40760.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



