Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susf/suse family outer membrane protein | IB64_RS20305 | Not Available | Negative | 4708006 - 4709604 | 58027.6 |
| ragb/susd family nutrient uptake outer membrane protein | IB64_RS20310 | Not Available | Negative | 4709639 - 4711258 | 60279.1 |
| tonb-dependent receptor | IB64_RS20315 | Not Available | Negative | 4711270 - 4714278 | 110968.0 |
| laci family dna-binding transcriptional regulator | IB64_RS20320 | Not Available | Positive | 4714708 - 4715718 | 37331.6 |
| slc45 family mfs transporter | IB64_RS20325 | Not Available | Positive | 4715853 - 4717169 | 47674.2 |
| pl29 family lyase n-terminal domain-containing protein | IB64_RS20330 | Not Available | Negative | 4717338 - 4719644 | 80525.0 |
| hypothetical protein | IB64_RS20335 | Not Available | Positive | 4720245 - 4720559 | 12641.0 |
| is1182 family transposase | IB64_RS24330 | Not Available | Positive | 4720675 - 4720896 | 8614.55 |
| hypothetical protein | IB64_RS24255 | Not Available | Positive | 4721080 - 4721652 | 21909.8 |
| rpn family recombination-promoting nuclease/putative transposase | IB64_RS20345 | Not Available | Positive | 4721957 - 4722847 | 34592.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



