Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyttr family dna-binding domain-containing protein | IB64_RS19760 | Not Available | Negative | 4582762 - 4583661 | 34313.5 |
| omph family outer membrane protein | IB64_RS19765 | Not Available | Negative | 4583805 - 4584407 | 22395.5 |
| hypothetical protein | IB64_RS19770 | Not Available | Negative | 4584435 - 4584668 | 8598.64 |
| aminoacyl-histidine dipeptidase | IB64_RS19775 | Not Available | Positive | 4584830 - 4586296 | 54078.4 |
| endonuclease/exonuclease/phosphatase family protein | IB64_RS19780 | Not Available | Positive | 4586397 - 4587431 | 39618.5 |
| mechanosensitive ion channel family protein | IB64_RS19785 | Not Available | Negative | 4587416 - 4588585 | 44049.9 |
| fructose-6-phosphate aldolase | IB64_RS19790 | Not Available | Negative | 4588723 - 4589379 | 23582.6 |
| alpha-l-fucosidase | IB64_RS19795 | Not Available | Negative | 4589445 - 4591262 | 67969.8 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | IB64_RS19800 | Not Available | Negative | 4591418 - 4594480 | 115744.0 |
| glycoside hydrolase family 20 protein | IB64_RS19805 | Not Available | Negative | 4594590 - 4596908 | 86895.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



