Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trypsin-like peptidase domain-containing protein | IB64_RS18030 | Not Available | Negative | 4207831 - 4209378 | 54728.4 |
| transglutaminase family protein | IB64_RS18035 | Not Available | Negative | 4209684 - 4211018 | 51672.5 |
| ahh domain-containing protein | IB64_RS18040 | Not Available | Negative | 4211028 - 4211525 | 18507.0 |
| dipeptide epimerase | IB64_RS18045 | Not Available | Negative | 4211542 - 4212693 | 41931.3 |
| nlpc/p60 family protein | IB64_RS18050 | Not Available | Negative | 4212707 - 4213909 | 44531.0 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 4214267 - 4214629 | Not Available |
| yihy/virulence factor brkb family protein | IB64_RS18060 | Not Available | Positive | 4214658 - 4215977 | 50852.3 |
| nitroreductase family protein | IB64_RS18065 | Not Available | Negative | 4216511 - 4217050 | 19694.0 |
| riboflavin synthase | IB64_RS18070 | Not Available | Negative | 4217062 - 4217664 | 22597.1 |
| phosphate signaling complex protein phou | IB64_RS18075 | Not Available | Negative | 4218046 - 4218735 | 26195.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



