Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4251 domain-containing protein | IB64_RS17490 | Not Available | Positive | 4091271 - 4091825 | 19799.9 |
| sensor histidine kinase | IB64_RS17495 | Not Available | Positive | 4092062 - 4093099 | 40214.0 |
| lyttr family dna-binding domain-containing protein | IB64_RS17500 | Not Available | Positive | 4093092 - 4093871 | 30255.6 |
| diaminopimelate epimerase | IB64_RS17505 | Not Available | Positive | 4094333 - 4095142 | 29464.4 |
| ll-diaminopimelate aminotransferase | IB64_RS17510 | Not Available | Positive | 4095230 - 4096462 | 45953.9 |
| glutamine synthetase iii | IB64_RS17515 | Not Available | Positive | 4096638 - 4098827 | 82352.0 |
| hded family acid-resistance protein | IB64_RS17520 | Not Available | Negative | 4099044 - 4099610 | 20669.3 |
| rna degradosome polyphosphate kinase | IB64_RS17525 | Not Available | Positive | 4099781 - 4101847 | 80010.5 |
| exopolyphosphatase | IB64_RS17530 | Not Available | Positive | 4101844 - 4102758 | 33863.9 |
| iron-containing alcohol dehydrogenase | IB64_RS17535 | Not Available | Negative | 4102913 - 4104058 | 42301.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



