Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 2 | IB64_RS01390 | Not Available | Negative | 316747 - 318603 | 69468.0 |
| rod shape-determining protein mred | IB64_RS01395 | Not Available | Negative | 318606 - 319103 | 18525.6 |
| rod shape-determining protein mrec | IB64_RS01400 | Not Available | Negative | 319100 - 319945 | 31825.7 |
| rod shape-determining protein | IB64_RS01405 | Not Available | Negative | 320048 - 321070 | 36911.8 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | IB64_RS01410 | Not Available | Negative | 321144 - 322667 | 56012.9 |
| m13 family metallopeptidase | IB64_RS01415 | Not Available | Negative | 322819 - 324852 | 76642.9 |
| abc-f family atp-binding cassette domain-containing protein | IB64_RS01420 | Not Available | Negative | 324868 - 326823 | 74330.8 |
| tonb-dependent receptor plug domain-containing protein | IB64_RS01425 | Not Available | Negative | 326990 - 329383 | 88869.7 |
| hypothetical protein | IB64_RS01430 | Not Available | Negative | 329773 - 330675 | 33498.8 |
| bama/tama family outer membrane protein | IB64_RS01435 | Not Available | Negative | 330802 - 333153 | 89711.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



