Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IB64_RS15940 | Not Available | Positive | 3746389 - 3746670 | 10990.4 |
| voc family protein | IB64_RS15945 | Not Available | Positive | 3746745 - 3747128 | 14355.9 |
| duf4891 domain-containing protein | IB64_RS15950 | Not Available | Negative | 3747121 - 3747534 | 16008.7 |
| nif3-like dinuclear metal center hexameric protein | IB64_RS15955 | Not Available | Positive | 3747640 - 3748734 | 40458.6 |
| zinc ribbon domain-containing protein | IB64_RS15960 | Not Available | Positive | 3748740 - 3749564 | 31900.2 |
| efflux transporter outer membrane subunit | IB64_RS15965 | Not Available | Positive | 3749802 - 3751208 | 52333.7 |
| efflux rnd transporter periplasmic adaptor subunit | IB64_RS15970 | Not Available | Positive | 3751227 - 3752366 | 41803.2 |
| efflux rnd transporter permease subunit | IB64_RS15975 | Not Available | Positive | 3752371 - 3755493 | 112759.0 |
| type i restriction enzyme hsdr n-terminal domain-containing protein | IB64_RS15980 | Not Available | Negative | 3755839 - 3756288 | 17495.4 |
| amp nucleosidase | IB64_RS15985 | Not Available | Positive | 3756353 - 3757129 | 28981.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



