Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spor domain-containing protein | IB64_RS15720 | Not Available | Negative | 3697254 - 3698315 | 39598.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | IB64_RS15725 | Not Available | Positive | 3698474 - 3699022 | 20730.5 |
| udp-glucose/gdp-mannose dehydrogenase family protein | IB64_RS15730 | Not Available | Positive | 3699046 - 3700359 | 48552.9 |
| duf4738 domain-containing protein | IB64_RS15735 | Not Available | Positive | 3700498 - 3701301 | 30613.6 |
| dead/deah box helicase | IB64_RS15740 | Not Available | Negative | 3701372 - 3702628 | 46620.2 |
| phosphoserine phosphatase serb | IB64_RS15745 | Not Available | Negative | 3702709 - 3703932 | 45625.9 |
| thioredoxin family protein | IB64_RS15755 | Not Available | Positive | 3704203 - 3704712 | 18888.5 |
| lptf/lptg family permease | IB64_RS15760 | Not Available | Negative | 3704877 - 3705974 | 41958.8 |
| trna guanosine(34) transglycosylase tgt | IB64_RS15765 | Not Available | Negative | 3705979 - 3707109 | 42332.2 |
| endopeptidase la | IB64_RS15770 | Not Available | Negative | 3707106 - 3709574 | 92548.9 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



