Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acp s-malonyltransferase | IB64_RS15515 | Not Available | Negative | 3651176 - 3652063 | 31173.7 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | IB64_RS15520 | Not Available | Negative | 3652166 - 3652999 | 29731.0 |
| nrtr dna-binding winged helix domain-containing protein | IB64_RS15525 | Not Available | Positive | 3653342 - 3654073 | 28413.8 |
| xylulokinase | IB64_RS15530 | Not Available | Positive | 3654124 - 3655629 | 54342.6 |
| xylose isomerase | IB64_RS15535 | Not Available | Positive | 3655722 - 3657041 | 49106.9 |
| d-xylose transporter xyle | IB64_RS15540 | Not Available | Positive | 3657106 - 3658554 | 52625.1 |
| nucleotide pyrophosphatase/phosphodiesterase family protein | IB64_RS15545 | Not Available | Negative | 3659110 - 3660318 | 46011.9 |
| carbon-nitrogen hydrolase family protein | IB64_RS15550 | Not Available | Positive | 3660424 - 3661965 | 59613.2 |
| peroxiredoxin | IB64_RS15555 | Not Available | Positive | 3662081 - 3662713 | 23527.8 |
| rna-binding protein | IB64_RS15560 | Not Available | Positive | 3662924 - 3663169 | 9304.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



