Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abgt family transporter | IB64_RS15405 | Not Available | Positive | 3630490 - 3631944 | 53691.2 |
| Trna-arg | Not Available | Not Available | Positive | 3632035 - 3632108 | Not Available |
| sos response-associated peptidase | IB64_RS15415 | Not Available | Positive | 3632359 - 3633057 | 27394.5 |
| hypothetical protein | IB64_RS15420 | Not Available | Positive | 3633232 - 3633969 | 27444.5 |
| aminodeoxychorismate synthase component i | IB64_RS15425 | Not Available | Positive | 3634090 - 3635073 | 36912.5 |
| aminotransferase class iv family protein | IB64_RS15430 | Not Available | Positive | 3635057 - 3635653 | 23289.1 |
| duf2461 domain-containing protein | IB64_RS15440 | Not Available | Positive | 3635941 - 3636609 | 26030.8 |
| alpha amylase c-terminal domain-containing protein | IB64_RS15445 | Not Available | Positive | 3636677 - 3638689 | 77557.9 |
| alpha-amylase family glycosyl hydrolase | IB64_RS15450 | Not Available | Negative | 3638758 - 3640455 | 65361.2 |
| gfo/idh/moca family oxidoreductase | IB64_RS15455 | Not Available | Negative | 3640467 - 3641525 | 39719.8 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



