Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| co-chaperone ybbn | IB64_RS15100 | Not Available | Negative | 3558507 - 3558863 | 13334.3 |
| tolc family protein | IB64_RS15105 | Not Available | Positive | 3559095 - 3560357 | 48457.4 |
| efflux rnd transporter periplasmic adaptor subunit | IB64_RS15110 | Not Available | Positive | 3560371 - 3561459 | 40563.5 |
| efflux rnd transporter permease subunit | IB64_RS15115 | Not Available | Positive | 3561474 - 3564599 | 114731.0 |
| response regulator transcription factor | IB64_RS15120 | Not Available | Positive | 3564633 - 3565307 | 25647.2 |
| hamp domain-containing sensor histidine kinase | IB64_RS15125 | Not Available | Positive | 3565325 - 3566662 | 50706.3 |
| marc family protein | IB64_RS15130 | Not Available | Positive | 3566844 - 3567518 | 24353.7 |
| sgnh/gdsl hydrolase family protein | IB64_RS15135 | Not Available | Negative | 3567562 - 3569307 | 65298.4 |
| precorrin-2 c(20)-methyltransferase | IB64_RS15145 | Not Available | Negative | 3570072 - 3570776 | 26413.8 |
| abc transporter substrate-binding protein | IB64_RS15150 | Not Available | Positive | 3570890 - 3572038 | 43089.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



