Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5686 and carboxypeptidase-like regulatory domain-containing protein | IB64_RS14010 | Not Available | Negative | 3299037 - 3301598 | 98108.0 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | IB64_RS14015 | Not Available | Negative | 3301712 - 3302797 | 40133.7 |
| trimeric intracellular cation channel family protein | IB64_RS14020 | Not Available | Positive | 3302882 - 3303508 | 22856.8 |
| duf4251 domain-containing protein | IB64_RS14025 | Not Available | Negative | 3303522 - 3304016 | 18491.4 |
| m48 family metallopeptidase | IB64_RS14030 | Not Available | Negative | 3304278 - 3305246 | 36079.2 |
| lema family protein | IB64_RS14035 | Not Available | Negative | 3305268 - 3305828 | 20946.3 |
| rna polymerase sigma factor | IB64_RS14040 | Not Available | Positive | 3306119 - 3306622 | 19816.8 |
| oxaloacetate decarboxylase | IB64_RS14045 | Not Available | Positive | 3306874 - 3308649 | 66790.0 |
| susc/raga family tonb-linked outer membrane protein | IB64_RS14050 | Not Available | Positive | 3309419 - 3312796 | 124783.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | IB64_RS14055 | Not Available | Positive | 3312818 - 3314707 | 71992.3 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



