Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | IB64_RS13305 | Not Available | Positive | 3145292 - 3148036 | 101704.0 |
| ragb/susd family nutrient uptake outer membrane protein | IB64_RS13310 | Not Available | Positive | 3148052 - 3149683 | 62686.6 |
| molecular chaperone dnaj | IB64_RS13315 | Not Available | Negative | 3150418 - 3151602 | 42100.3 |
| nucleotide exchange factor grpe | IB64_RS13320 | Not Available | Negative | 3151653 - 3152240 | 21979.9 |
| abc-f family atp-binding cassette domain-containing protein | IB64_RS13325 | Not Available | Positive | 3152475 - 3154088 | 61153.9 |
| rna polymerase sigma factor | IB64_RS13330 | Not Available | Positive | 3154286 - 3154849 | 22088.9 |
| hypothetical protein | IB64_RS13335 | Not Available | Positive | 3154846 - 3155268 | 16293.7 |
| hypothetical protein | IB64_RS13340 | Not Available | Positive | 3155289 - 3156356 | 41579.6 |
| leucine-rich repeat protein | IB64_RS13345 | Not Available | Negative | 3156494 - 3157540 | 38765.3 |
| cpbp family intramembrane glutamic endopeptidase | IB64_RS13350 | Not Available | Positive | 3157645 - 3158565 | 34621.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



