Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| reverse transcriptase/maturase family protein | IB64_RS12485 | Not Available | Positive | 2964588 - 2966399 | 70935.6 |
| is1182 family transposase | IB64_RS24415 | Not Available | Positive | 2966424 - 2966537 | 4526.44 |
| efflux transporter outer membrane subunit | IB64_RS12500 | Not Available | Negative | 2967444 - 2968802 | 49656.1 |
| efflux rnd transporter permease subunit | IB64_RS12505 | Not Available | Negative | 2968803 - 2971916 | 112763.0 |
| efflux rnd transporter periplasmic adaptor subunit | IB64_RS12510 | Not Available | Negative | 2971913 - 2973037 | 40647.0 |
| gnat family n-acetyltransferase | IB64_RS12515 | Not Available | Negative | 2973034 - 2973573 | 20804.8 |
| sensor histidine kinase | IB64_RS12520 | Not Available | Positive | 2973865 - 2974950 | 41274.9 |
| lyttr family dna-binding domain-containing protein | IB64_RS12525 | Not Available | Positive | 2974931 - 2975686 | 29069.8 |
| conjugal transfer protein moba | IB64_RS12530 | Not Available | Negative | 2975710 - 2976132 | 16936.8 |
| duf3408 domain-containing protein | IB64_RS12540 | Not Available | Negative | 2976412 - 2976879 | 17870.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



