Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IB64_RS12340 | Not Available | Negative | 2932339 - 2932602 | 9848.19 |
| phage holin family protein | IB64_RS12345 | Not Available | Negative | 2932607 - 2932972 | 13865.8 |
| ytxh domain-containing protein | IB64_RS12350 | Not Available | Negative | 2932999 - 2933208 | 7372.09 |
| dead/deah box helicase | IB64_RS12355 | Not Available | Negative | 2933675 - 2934958 | 47628.9 |
| sdr family nad(p)-dependent oxidoreductase | IB64_RS12360 | Not Available | Positive | 2935148 - 2935918 | 27716.5 |
| spor domain-containing protein | IB64_RS12365 | Not Available | Positive | 2936032 - 2936529 | 17888.4 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | IB64_RS12370 | Not Available | Negative | 2936629 - 2939301 | 100980.0 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | IB64_RS12375 | Not Available | Positive | 2940035 - 2940853 | 30488.6 |
| slc13 family permease | IB64_RS12380 | Not Available | Positive | 2940874 - 2942430 | 57074.6 |
| adenylyl-sulfate kinase | IB64_RS12385 | Not Available | Positive | 2942459 - 2943067 | 22707.3 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



