Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 8-amino-7-oxononanoate synthase | IB64_RS12080 | Not Available | Negative | 2872098 - 2873285 | 44236.2 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | IB64_RS12085 | Not Available | Negative | 2873419 - 2875656 | 82950.1 |
| hypothetical protein | IB64_RS12090 | Not Available | Negative | 2875646 - 2876053 | 15358.2 |
| tonb-dependent receptor | IB64_RS12095 | Not Available | Positive | 2876381 - 2879509 | 115187.0 |
| ragb/susd family nutrient uptake outer membrane protein | IB64_RS12100 | Not Available | Positive | 2879609 - 2881201 | 60606.4 |
| l-lactate permease | IB64_RS12105 | Not Available | Negative | 2881337 - 2882836 | 52979.8 |
| cysteine peptidase family c39 domain-containing protein | IB64_RS12110 | Not Available | Negative | 2883189 - 2883350 | 6167.52 |
| tonb-dependent siderophore receptor | IB64_RS12115 | Not Available | Negative | 2883347 - 2885554 | 83803.6 |
| is1182 family transposase | IB64_RS12120 | Not Available | Positive | 2885819 - 2886157 | 13362.4 |
| duf3868 domain-containing protein | IB64_RS12125 | Not Available | Negative | 2886389 - 2887837 | 54337.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



