Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing sensor histidine kinase | IB64_RS12030 | Not Available | Negative | 2857038 - 2858294 | 47492.5 |
| sigma-54 dependent transcriptional regulator | IB64_RS12035 | Not Available | Negative | 2858300 - 2859640 | 50176.1 |
| tolc family protein | IB64_RS12040 | Not Available | Positive | 2859922 - 2861241 | 50931.4 |
| efflux rnd transporter periplasmic adaptor subunit | IB64_RS12045 | Not Available | Positive | 2861382 - 2862629 | 47432.0 |
| abc transporter permease | IB64_RS12050 | Not Available | Positive | 2862642 - 2865047 | 91399.7 |
| abc transporter atp-binding protein | IB64_RS12055 | Not Available | Positive | 2865069 - 2865785 | 26490.1 |
| abc transporter permease | IB64_RS12060 | Not Available | Positive | 2865782 - 2868202 | 91995.5 |
| nad(p)/fad-dependent oxidoreductase | IB64_RS12065 | Not Available | Negative | 2868359 - 2869705 | 50687.3 |
| dethiobiotin synthase | IB64_RS12070 | Not Available | Negative | 2869933 - 2870574 | 24335.1 |
| malonyl-acp o-methyltransferase bioc | IB64_RS12075 | Not Available | Negative | 2870606 - 2872051 | 55125.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



