Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gin domain-containing protein | IB64_RS11620 | Not Available | Positive | 2762231 - 2762875 | 22806.7 |
| abc transporter permease | IB64_RS11625 | Not Available | Positive | 2762886 - 2764184 | 47631.2 |
| ftsx-like permease family protein | IB64_RS11630 | Not Available | Positive | 2764199 - 2765443 | 48003.2 |
| atp-binding protein | IB64_RS11635 | Not Available | Positive | 2765540 - 2768152 | 98716.0 |
| tolc family protein | IB64_RS11640 | Not Available | Positive | 2768433 - 2769905 | 55767.2 |
| sigma-54 dependent transcriptional regulator | IB64_RS11645 | Not Available | Positive | 2769958 - 2771307 | 50085.2 |
| pas domain-containing sensor histidine kinase | IB64_RS11650 | Not Available | Positive | 2771351 - 2772643 | 48748.6 |
| aspartate 4-decarboxylase | IB64_RS11655 | Not Available | Negative | 2772632 - 2774275 | 62424.8 |
| aspartate-alanine antiporter | IB64_RS11660 | Not Available | Negative | 2774317 - 2776014 | 60805.3 |
| lysylphosphatidylglycerol synthase transmembrane domain-containing protein | IB64_RS11665 | Not Available | Positive | 2776146 - 2777135 | 37044.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



