Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-f family atp-binding cassette domain-containing protein | IB64_RS11515 | Not Available | Negative | 2738664 - 2740253 | 59814.1 |
| fad-dependent oxidoreductase | IB64_RS11520 | Not Available | Negative | 2740527 - 2741903 | 50053.3 |
| duf417 family protein | IB64_RS11525 | Not Available | Negative | 2741962 - 2742564 | 22133.2 |
| arac family transcriptional regulator | IB64_RS11530 | Not Available | Negative | 2742652 - 2743491 | 32733.1 |
| cytidine deaminase | IB64_RS11535 | Not Available | Negative | 2743494 - 2743976 | 17730.1 |
| glucosaminidase domain-containing protein | IB64_RS11540 | Not Available | Positive | 2744093 - 2744992 | 34452.2 |
| efflux rnd transporter periplasmic adaptor subunit | IB64_RS11550 | Not Available | Positive | 2745291 - 2746538 | 46175.8 |
| abc transporter permease | IB64_RS11555 | Not Available | Positive | 2746659 - 2747924 | 47043.8 |
| abc transporter permease | IB64_RS11560 | Not Available | Positive | 2747946 - 2749214 | 49200.9 |
| abc transporter permease | IB64_RS11565 | Not Available | Positive | 2749236 - 2750540 | 48906.7 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



