Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system tube protein tssd | IB64_RS10940 | Not Available | Positive | 2616421 - 2616828 | 15506.4 |
| type vi secretion system tube protein tssd | IB64_RS10945 | Not Available | Positive | 2616831 - 2617250 | 16016.8 |
| hypothetical protein | IB64_RS10950 | Not Available | Positive | 2617255 - 2617713 | 17179.7 |
| gpw/gp25 family protein | IB64_RS10955 | Not Available | Positive | 2617710 - 2618150 | 17158.7 |
| type vi secretion system baseplate subunit tssf | IB64_RS10960 | Not Available | Positive | 2618181 - 2619998 | 68449.9 |
| type vi secretion system vgr family protein | IB64_RS10965 | Not Available | Positive | 2620024 - 2621874 | 67648.6 |
| paar domain-containing protein | IB64_RS10970 | Not Available | Positive | 2621893 - 2622582 | 24476.1 |
| toxin vasx | IB64_RS10975 | Not Available | Positive | 2622586 - 2625693 | 118628.0 |
| hypothetical protein | IB64_RS10980 | Not Available | Positive | 2625681 - 2626871 | 45683.1 |
| tssn family type vi secretion system protein | IB64_RS10985 | Not Available | Positive | 2626957 - 2627805 | 32763.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



