Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lapa family protein | IB64_RS09985 | Not Available | Positive | 2381387 - 2381827 | 16557.8 |
| sodium ion-translocating decarboxylase subunit beta | IB64_RS09990 | Not Available | Positive | 2381839 - 2383053 | 43169.9 |
| helix-turn-helix transcriptional regulator | IB64_RS09995 | Not Available | Positive | 2383155 - 2384030 | 34072.1 |
| pyridoxamine 5'-phosphate oxidase family protein | IB64_RS10000 | Not Available | Positive | 2384122 - 2384541 | 16134.5 |
| hypothetical protein | IB64_RS10005 | Not Available | Negative | 2384555 - 2387413 | 109748.0 |
| gnat family n-acetyltransferase | IB64_RS10010 | Not Available | Negative | 2387472 - 2388371 | 34627.4 |
| rlua family pseudouridine synthase | IB64_RS10015 | Not Available | Negative | 2388382 - 2390001 | 61465.8 |
| type iii restriction-modification system endonuclease | IB64_RS10020 | Not Available | Negative | 2390017 - 2393049 | 116272.0 |
| site-specific dna-methyltransferase | IB64_RS10025 | Not Available | Negative | 2393071 - 2395065 | 76060.9 |
| tim-barrel domain-containing protein | IB64_RS10030 | Not Available | Positive | 2395453 - 2399319 | 144426.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



