Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | IB64_RS09100 | Not Available | Positive | 2169194 - 2169769 | 22796.5 |
| fecr family protein | IB64_RS09105 | Not Available | Positive | 2169894 - 2170880 | 37608.1 |
| tonb-dependent receptor | IB64_RS09110 | Not Available | Positive | 2171133 - 2174525 | 126267.0 |
| ragb/susd family nutrient uptake outer membrane protein | IB64_RS09115 | Not Available | Positive | 2174540 - 2176318 | 66751.9 |
| gfo/idh/moca family protein | IB64_RS09120 | Not Available | Negative | 2176402 - 2177652 | 46955.4 |
| Trna-gly | Not Available | Not Available | Positive | 2177714 - 2177789 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 2177795 - 2177880 | Not Available |
| 6,7-dimethyl-8-ribityllumazine synthase | IB64_RS09135 | Not Available | Negative | 2177953 - 2178447 | 17731.3 |
| tol-pal system ybgf family protein | IB64_RS09140 | Not Available | Negative | 2178533 - 2179216 | 24715.4 |
| dna replication/repair protein recf | IB64_RS09145 | Not Available | Positive | 2179377 - 2180489 | 42758.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



