Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-6 dna methylase | IB64_RS09000 | Not Available | Negative | 2131842 - 2137682 | 220158.0 |
| duf1896 domain-containing protein | IB64_RS09005 | Not Available | Negative | 2137672 - 2138124 | 17341.2 |
| type ia dna topoisomerase | IB64_RS09010 | Not Available | Negative | 2138288 - 2140378 | 77405.7 |
| duf4099 domain-containing protein | IB64_RS09015 | Not Available | Negative | 2140438 - 2142015 | 60048.1 |
| helix-turn-helix domain-containing protein | IB64_RS09020 | Not Available | Negative | 2142035 - 2142385 | 13869.8 |
| helix-turn-helix domain-containing protein | IB64_RS09025 | Not Available | Negative | 2142389 - 2142781 | 14811.0 |
| helix-turn-helix domain-containing protein | IB64_RS09030 | Not Available | Positive | 2143032 - 2143325 | 11277.9 |
| helix-turn-helix domain-containing protein | IB64_RS09035 | Not Available | Positive | 2143365 - 2143670 | 11924.4 |
| hypothetical protein | IB64_RS09040 | Not Available | Negative | 2143750 - 2144112 | 13607.6 |
| site-specific integrase | IB64_RS09045 | Not Available | Negative | 2144124 - 2145359 | 47932.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



