Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide assembly protein lapb | IB64_RS00505 | Not Available | Positive | 111536 - 112498 | 36271.0 |
| soca family protein | IB64_RS00510 | Not Available | Positive | 113800 - 114363 | 21893.2 |
| hypothetical protein | IB64_RS00515 | Not Available | Positive | 114411 - 116828 | 94083.4 |
| prephenate dehydratase | IB64_RS00520 | Not Available | Positive | 117390 - 118235 | 31928.2 |
| pyridoxal phosphate-dependent aminotransferase | IB64_RS00525 | Not Available | Positive | 118210 - 119394 | 44305.3 |
| bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type ii | IB64_RS00530 | Not Available | Positive | 119417 - 120478 | 39611.0 |
| prephenate dehydrogenase/arogenate dehydrogenase family protein | IB64_RS00535 | Not Available | Positive | 120494 - 121267 | 29398.5 |
| dna primase | IB64_RS00545 | Not Available | Positive | 122013 - 124016 | 76423.7 |
| sulfatase | IB64_RS00550 | Not Available | Negative | 124151 - 125677 | 56978.9 |
| ragb/susd family nutrient uptake outer membrane protein | IB64_RS00555 | Not Available | Negative | 125729 - 127336 | 60947.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



