Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine--trna ligase | IB64_RS07955 | Not Available | Negative | 1881127 - 1883745 | 97533.6 |
| m23 family metallopeptidase | IB64_RS07960 | Not Available | Positive | 1883849 - 1884817 | 36367.8 |
| merr family transcriptional regulator | IB64_RS07965 | Not Available | Positive | 1884832 - 1885197 | 14492.5 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | IB64_RS07970 | Not Available | Negative | 1885241 - 1887487 | 86029.5 |
| lytic transglycosylase domain-containing protein | IB64_RS07975 | Not Available | Negative | 1887556 - 1888854 | 49018.8 |
| duf5683 domain-containing protein | IB64_RS07980 | Not Available | Negative | 1888879 - 1889748 | 32656.4 |
| parb/repb/spo0j family partition protein | IB64_RS07985 | Not Available | Negative | 1889749 - 1890639 | 33671.6 |
| para family protein | IB64_RS07990 | Not Available | Negative | 1890648 - 1891415 | 28010.0 |
| 5'/3'-nucleotidase sure | IB64_RS08000 | Not Available | Positive | 1891920 - 1892687 | 27942.4 |
| lipid-a-disaccharide synthase | IB64_RS08005 | Not Available | Positive | 1892684 - 1893817 | 42911.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



