Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome small subunit-dependent gtpase a | IB64_RS07600 | Not Available | Negative | 1789195 - 1790127 | 34825.4 |
| ribosome recycling factor | IB64_RS07605 | Not Available | Negative | 1790227 - 1790787 | 20765.3 |
| sh3 domain-containing protein | IB64_RS07610 | Not Available | Negative | 1790914 - 1791972 | 39091.8 |
| l,d-transpeptidase | IB64_RS07615 | Not Available | Negative | 1791980 - 1792534 | 20556.2 |
| sh3 domain-containing protein | IB64_RS07620 | Not Available | Negative | 1792545 - 1795340 | 105778.0 |
| hsp70 family protein | IB64_RS07625 | Not Available | Negative | 1795368 - 1796957 | 58632.2 |
| nucleotide exchange factor grpe | IB64_RS07630 | Not Available | Negative | 1796997 - 1797845 | 32878.4 |
| ump kinase | IB64_RS07635 | Not Available | Negative | 1798602 - 1799312 | 25606.2 |
| mate family efflux transporter | IB64_RS07640 | Not Available | Negative | 1799386 - 1800705 | 49231.2 |
| lipopolysaccharide assembly protein lapb | IB64_RS07645 | Not Available | Positive | 1800843 - 1801526 | 26058.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



