Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidine kinase | IB64_RS07435 | Not Available | Negative | 1740411 - 1741010 | 22181.6 |
| hypothetical protein | IB64_RS07440 | Not Available | Positive | 1741015 - 1741809 | 29766.5 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | IB64_RS07445 | Not Available | Positive | 1741828 - 1742502 | 24890.3 |
| hypothetical protein | IB64_RS07450 | Not Available | Positive | 1742538 - 1743395 | 31714.1 |
| yjjg family noncanonical pyrimidine nucleotidase | IB64_RS07455 | Not Available | Positive | 1743486 - 1744178 | 27071.1 |
| marc family protein | IB64_RS07460 | Not Available | Positive | 1744235 - 1744879 | 23631.1 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | IB64_RS07465 | Not Available | Negative | 1744989 - 1746587 | 58421.9 |
| susc/raga family tonb-linked outer membrane protein | IB64_RS07470 | Not Available | Negative | 1746599 - 1749781 | 115532.0 |
| tsr0667 family tyrosine-type dna invertase | IB64_RS07480 | Not Available | Positive | 1750235 - 1751416 | 46102.9 |
| is1182 family transposase | IB64_RS07485 | Not Available | Positive | 1752011 - 1754845 | 104956.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



