Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | IB64_RS06460 | Not Available | Negative | 1569190 - 1571529 | 88244.3 |
| class i sam-dependent methyltransferase | IB64_RS06465 | Not Available | Negative | 1571542 - 1572357 | 31708.8 |
| helix-turn-helix transcriptional regulator | IB64_RS06470 | Not Available | Positive | 1572546 - 1573553 | 38632.4 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | IB64_RS06475 | Not Available | Negative | 1573710 - 1574444 | 28111.5 |
| retron system putative hnh endonuclease | IB64_RS06480 | Not Available | Negative | 1575436 - 1576212 | 30583.4 |
| aaa family atpase | IB64_RS06485 | Not Available | Negative | 1576196 - 1577950 | 68288.0 |
| dna adenine methylase | IB64_RS06490 | Not Available | Negative | 1577953 - 1579128 | 46021.6 |
| duf5712 family protein | IB64_RS06495 | Not Available | Negative | 1579264 - 1580178 | 35166.4 |
| bfma/btga family mobilization protein | IB64_RS06500 | Not Available | Negative | 1580183 - 1580767 | 22361.2 |
| helix-turn-helix domain-containing protein | IB64_RS06510 | Not Available | Negative | 1581052 - 1581384 | 13248.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



