Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 95 catalytic domain-containing protein | IB64_RS06410 | Not Available | Positive | 1548775 - 1551177 | 90502.3 |
| tonb-dependent receptor | IB64_RS06415 | Not Available | Positive | 1551273 - 1554554 | 121392.0 |
| ragb/susd family nutrient uptake outer membrane protein | IB64_RS06420 | Not Available | Positive | 1554567 - 1556135 | 59718.0 |
| right-handed parallel beta-helix repeat-containing protein | IB64_RS06425 | Not Available | Positive | 1556141 - 1558033 | 71039.2 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | IB64_RS06430 | Not Available | Positive | 1558014 - 1560932 | 110406.0 |
| duf5054 domain-containing protein | IB64_RS06435 | Not Available | Positive | 1560967 - 1563027 | 78898.4 |
| beta-galactosidase | IB64_RS06440 | Not Available | Positive | 1563035 - 1565818 | 105929.0 |
| glycoside hydrolase 43 family protein | IB64_RS06445 | Not Available | Positive | 1565832 - 1567412 | 59517.4 |
| duf4250 domain-containing protein | IB64_RS06450 | Not Available | Negative | 1567661 - 1567837 | 6839.21 |
| hypothetical protein | IB64_RS06455 | Not Available | Negative | 1567933 - 1569156 | 44073.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



