Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| omph family outer membrane protein | IB64_RS05905 | Not Available | Negative | 1425295 - 1425810 | 19231.2 |
| outer membrane protein assembly factor bama | IB64_RS05910 | Not Available | Negative | 1425835 - 1428471 | 101061.0 |
| isoprenyl transferase | IB64_RS05915 | Not Available | Negative | 1428495 - 1429229 | 28286.7 |
| duf6242 domain-containing protein | IB64_RS05920 | Not Available | Negative | 1429238 - 1430593 | 50018.7 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | IB64_RS05925 | Not Available | Negative | 1430732 - 1431772 | 39183.6 |
| peptide chain release factor n(5)-glutamine methyltransferase | IB64_RS05930 | Not Available | Positive | 1431826 - 1432662 | 31430.8 |
| regulatory protein recx | IB64_RS05935 | Not Available | Positive | 1432659 - 1433123 | 18163.0 |
| orotate phosphoribosyltransferase | IB64_RS05940 | Not Available | Positive | 1433219 - 1433857 | 23519.4 |
| srpbcc family protein | IB64_RS05945 | Not Available | Positive | 1433958 - 1434368 | 15643.2 |
| argininosuccinate lyase | IB64_RS05950 | Not Available | Positive | 1434374 - 1435717 | 50753.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



