Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | IB64_RS05390 | Not Available | Positive | 1310488 - 1312053 | 58248.6 |
| Trna-leu | Not Available | Not Available | Positive | 1312344 - 1312428 | Not Available |
| tonb-dependent receptor | IB64_RS05405 | Not Available | Positive | 1312825 - 1315884 | 112536.0 |
| ragb/susd family nutrient uptake outer membrane protein | IB64_RS05410 | Not Available | Positive | 1315914 - 1317401 | 54559.7 |
| s41 family peptidase | IB64_RS05415 | Not Available | Negative | 1317478 - 1318509 | 39230.2 |
| duf3316 domain-containing protein | IB64_RS05420 | Not Available | Negative | 1318524 - 1319360 | 31489.6 |
| dna gyrase/topoisomerase iv subunit a | IB64_RS05425 | Not Available | Negative | 1319418 - 1322066 | 100982.0 |
| glycine--trna ligase | IB64_RS05430 | Not Available | Positive | 1322251 - 1323792 | 59395.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | IB64_RS05435 | Not Available | Positive | 1323804 - 1324355 | 21035.2 |
| pyridoxamine 5'-phosphate oxidase family protein | IB64_RS05440 | Not Available | Positive | 1324477 - 1324980 | 19284.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



