Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | IB64_RS00205 | Not Available | Negative | 41627 - 42754 | 44180.5 |
| duf2027 domain-containing protein | IB64_RS00210 | Not Available | Negative | 42953 - 44002 | 39846.0 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | IB64_RS00215 | Not Available | Positive | 44083 - 45303 | 46205.4 |
| nudix domain-containing protein | IB64_RS00220 | Not Available | Positive | 45307 - 45837 | 19667.0 |
| glutathione peroxidase | IB64_RS00225 | Not Available | Negative | 45957 - 46499 | 20385.6 |
| gh92 family glycosyl hydrolase | IB64_RS00230 | Not Available | Negative | 46562 - 48904 | 87936.0 |
| cusa/czca family heavy metal efflux rnd transporter | IB64_RS00235 | Not Available | Positive | 49083 - 53402 | 160191.0 |
| efflux rnd transporter periplasmic adaptor subunit | IB64_RS00240 | Not Available | Positive | 53423 - 54310 | 32200.9 |
| sensor histidine kinase | IB64_RS00245 | Not Available | Positive | 54339 - 55400 | 41125.2 |
| lyttr family dna-binding domain-containing protein | IB64_RS00250 | Not Available | Positive | 55397 - 56176 | 29670.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



