Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospho-n-acetylmuramoyl-pentapeptide- transferase | IB64_RS04960 | Not Available | Negative | 1184635 - 1185903 | 46871.6 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | IB64_RS04965 | Not Available | Negative | 1185988 - 1187445 | 53338.0 |
| penicillin-binding protein | IB64_RS04970 | Not Available | Negative | 1187463 - 1189562 | 76942.8 |
| ftsl-like putative cell division protein | IB64_RS04975 | Not Available | Negative | 1189590 - 1189931 | 13272.1 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | IB64_RS04980 | Not Available | Negative | 1189960 - 1190874 | 34617.3 |
| is1182 family transposase | IB64_RS04985 | Not Available | Negative | 1190895 - 1191346 | 17720.7 |
| hu family dna-binding protein | IB64_RS04990 | Not Available | Negative | 1191453 - 1191953 | 18300.6 |
| rna polymerase sigma factor | IB64_RS04995 | Not Available | Negative | 1192315 - 1192821 | 20124.0 |
| tonb-dependent receptor | IB64_RS05005 | Not Available | Positive | 1193424 - 1195583 | 80807.4 |
| duf4625 domain-containing protein | IB64_RS05010 | Not Available | Positive | 1195580 - 1196068 | 17922.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



