Bacteroides fragilis strain DCMOUH0042B

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis strain DCMOUH0042B is a Gram-negative, rod-shaped anaerobe classified as a chemoorganotroph, utilizing organic compounds for energy. This organism is notable for its habitat association with various hosts, including Homo sapiens, Gallus gallus, Metazoa, Equidae, and Serpentes. The strain typically exists as single cells and does not exhibit mobility, though it possesses flagella. This bacterium thrives optimally at a temperature of 37°C, which aligns with its mesophilic classification. It features two replicons and possesses a double-membrane structure, characteristic of its Gram-negative nature. Bacteroides fragilis strain DCMOUH0042B has been implicated in several health issues, demonstrating pathogenicity in humans. It is associated with conditions such as bacteremia, abscesses, Alzheimer’s disease pathologies, diarrhea, colitis, septicemia, colorectal cancer (CRC), and various local tissue infections. The strain's ability to cause anaerobic bacteremia and soft-tissue infections highlights its clinical significance, particularly in immunocompromised individuals. The biological insights regarding Bacteroides fragilis strain DCMOUH0042B underscore its role in both health and disease. As a free-living organism associated with multiple hosts, it contributes to the complex microbiota of the gastrointestinal tract, influencing human health and disease states. Understanding its pathogenic potential and ecological roles can inform treatment strategies and microbial management in clinical settings.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
Strainstrain DCMOUH0042B

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis strain DCMOUH0042B
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityHuman

Genome Summary

Bacteroides fragilis strain DCMOUH0042B chromosome, complete

Gene Summary

Adenine Count

1453684 bp

Thymine Count

1458792 bp

Guanine Count

1112819 bp

Cytosine Count

1115962 bp

Genome Length

5141257 bp

Protein-coding Genes

4090 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation initiation factor if-2HR50_RS04855Not AvailablePositive1092072 - 1095119112637.0
cvpa family proteinHR50_RS04860Not AvailablePositive1095194 - 109569718046.0
fe-s cluster assembly protein sufbHR50_RS04865Not AvailablePositive1095703 - 109715754281.3
hypothetical proteinHR50_RS04870Not AvailablePositive1097157 - 109790327916.4
fe-s cluster assembly atpase sufcHR50_RS04875Not AvailablePositive1097927 - 109867927785.8
fe-s cluster assembly protein sufdHR50_RS04880Not AvailablePositive1098688 - 110003150278.0
cysteine desulfuraseHR50_RS04885Not AvailablePositive1100043 - 110125444930.1
heavy metal-binding domain-containing proteinHR50_RS04890Not AvailablePositive1101546 - 110186611318.6
alpha-galactosidase dHR50_RS04895Not AvailableNegative1101941 - 110353360480.6
ragb/susd family nutrient uptake outer membrane proteinHR50_RS04900Not AvailableNegative1103625 - 110546969853.6

Displaying genes 891 – 900 of 4189 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Ad pathologiesCausesPMC10482867
DiarrheaCausesPMC13367044
ColitisCausesPMC13367044
Tumor formationCausesPMC13367044
Anaerobic bacteremiaCausesPMC5704556
Intraabdominal abscessesCausesPMC5704556
Colorectal cancerCausesPMC11704243
CrcCausesPMC11704243
BacteremiaCausesPMC8554563
SepticemiaCausesPMC8554563

Displaying health effects 1 – 10 of 19 in total