Bacteroides fragilis strain DCMOUH0042B

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis strain DCMOUH0042B is a Gram-negative, rod-shaped anaerobe classified as a chemoorganotroph, utilizing organic compounds for energy. This organism is notable for its habitat association with various hosts, including Homo sapiens, Gallus gallus, Metazoa, Equidae, and Serpentes. The strain typically exists as single cells and does not exhibit mobility, though it possesses flagella. This bacterium thrives optimally at a temperature of 37°C, which aligns with its mesophilic classification. It features two replicons and possesses a double-membrane structure, characteristic of its Gram-negative nature. Bacteroides fragilis strain DCMOUH0042B has been implicated in several health issues, demonstrating pathogenicity in humans. It is associated with conditions such as bacteremia, abscesses, Alzheimer’s disease pathologies, diarrhea, colitis, septicemia, colorectal cancer (CRC), and various local tissue infections. The strain's ability to cause anaerobic bacteremia and soft-tissue infections highlights its clinical significance, particularly in immunocompromised individuals. The biological insights regarding Bacteroides fragilis strain DCMOUH0042B underscore its role in both health and disease. As a free-living organism associated with multiple hosts, it contributes to the complex microbiota of the gastrointestinal tract, influencing human health and disease states. Understanding its pathogenic potential and ecological roles can inform treatment strategies and microbial management in clinical settings.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
Strainstrain DCMOUH0042B

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis strain DCMOUH0042B
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityHuman

Genome Summary

Bacteroides fragilis strain DCMOUH0042B chromosome, complete

Gene Summary

Adenine Count

1453684 bp

Thymine Count

1458792 bp

Guanine Count

1112819 bp

Cytosine Count

1115962 bp

Genome Length

5141257 bp

Protein-coding Genes

4090 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aldehyde dehydrogenase family proteinHR50_RS04710Not AvailablePositive1063054 - 106349116178.1
hypothetical proteinHR50_RS22980Not AvailableNegative1063412 - 10636458494.39
is1380-like element is613 family transposaseHR50_RS04720Not AvailableNegative1063658 - 106494449574.1
aldehyde dehydrogenase family proteinHR50_RS04725Not AvailablePositive1065083 - 106642051448.6
hypothetical proteinHR50_RS04730Not AvailablePositive1066429 - 106750842373.3
biosynthetic arginine decarboxylaseHR50_RS04735Not AvailablePositive1067566 - 106945871193.8
acetylglutamate kinaseHR50_RS04740Not AvailablePositive1069598 - 107037127479.3
rna polymerase sigma factorHR50_RS04745Not AvailablePositive1070433 - 107094220106.1
hypothetical proteinHR50_RS04750Not AvailablePositive1070932 - 107144119478.2
duf4252 domain-containing proteinHR50_RS04755Not AvailablePositive1071446 - 107192218063.3

Displaying genes 861 – 870 of 4189 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Ad pathologiesCausesPMC10482867
DiarrheaCausesPMC13367044
ColitisCausesPMC13367044
Tumor formationCausesPMC13367044
Anaerobic bacteremiaCausesPMC5704556
Intraabdominal abscessesCausesPMC5704556
Colorectal cancerCausesPMC11704243
CrcCausesPMC11704243
BacteremiaCausesPMC8554563
SepticemiaCausesPMC8554563

Displaying health effects 1 – 10 of 19 in total