Bacteroides fragilis strain DCMOUH0042B

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis strain DCMOUH0042B is a Gram-negative, rod-shaped bacterium that exists as single cells and is classified as an anaerobic chemoorganotroph. This strain thrives optimally at 37.0 degrees Celsius, which aligns with the human body temperature, suggesting its adaptation to a host-associated habitat. As a member of the Bacteroides genus, this strain is likely to play a significant role in the gut microbiome, where it may contribute to the breakdown of complex carbohydrates and the production of short-chain fatty acids, which are important for host health. The anaerobic nature of Bacteroides fragilis strain DCMOUH0042B indicates that it thrives in low-oxygen environments, such as the intestinal tract, where it may engage in symbiotic relationships with its host. Moreover, the ability of this strain to utilize organic compounds for energy underscores its potential role in nutrient cycling within the gut ecosystem. The specific metabolic pathways utilized by Bacteroides fragilis strain DCMOUH0042B could provide insights into its functional contributions to gut health and its interactions with other microbial species. Understanding these traits may enhance our knowledge of gut microbial ecology and the dynamics of microbial communities in host-associated environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
Strainstrain DCMOUH0042B

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis strain DCMOUH0042B
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityHuman

Genome Summary

Bacteroides fragilis strain DCMOUH0042B


Gene Summary

Adenine Count

1453684 bp

Thymine Count

1458792 bp

Guanine Count

1112819 bp

Cytosine Count

1115962 bp

Genome Length

5141257 bp

Protein-coding Genes

4090 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaHR50_RS00005Not Available+1 - 143154186.0
nadph-dependent oxidoreductaseHR50_RS00010Not Available-1519 - 226228387.2
adenosylcobalamin-dependent ribonucleoside-diphosphate reductaseHR50_RS00015Not Available+2547 - 509096128.0
4-alpha-glucanotransferaseHR50_RS00020Not Available+5288 - 7990106114.0
acyltransferase family proteinHR50_RS00025Not Available+8120 - 915139657.0
dihydroneopterin aldolaseHR50_RS00030Not Available+9202 - 957014142.0
tlpa family protein disulfide reductaseHR50_RS00035Not Available+9594 - 1101554575.4
methylglyoxal synthaseHR50_RS00045Not Available-11580 - 1209819792.8
glycosyltransferase family 2 proteinHR50_RS00050Not Available-12103 - 1313439152.3
lysophospholipid acyltransferase family proteinHR50_RS00055Not Available-13127 - 1402335658.9

Displaying genes 1 – 10 of 4189 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites