Egibacter rhizosphaerae strain EGI 80759

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Nitriliruptoria

Order

Egibacterales

Family

Egibacteraceae

Genus

Egibacter

Description

Egibacter rhizosphaerae strain EGI 80759 is characterized by its single replicon, which simplifies its genomic structure and may influence its genetic stability and replication efficiency. The strain is cataloged under the accession number NZ_CP036402.1, indicating its availability in genomic databases for further research and reference. As a member of the Egibacter genus, E. rhizosphaerae is likely to inhabit the rhizosphere, the region of soil influenced by root secretions and associated soil microorganisms. This ecological niche suggests that EGI 80759 may play a role in plant-microbe interactions, potentially contributing to nutrient cycling, plant health, or soil fertility. The presence of such bacteria in the rhizosphere is often associated with beneficial effects on plant growth, which is an essential area of study in agricultural microbiology. The traits of E. rhizosphaerae strain EGI 80759, particularly its genomic structure and ecological niche, provide insights into its potential functions and applications in sustainable agriculture and environmental management. Understanding the role of this strain in the rhizosphere could lead to the development of biofertilizers or biocontrol agents that enhance plant growth and resilience against pathogens.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassNitriliruptoria
OrderEgibacterales
FamilyEgibacteraceae
GenusEgibacter
SpeciesEgibacter rhizosphaerae
Strainstrain EGI 80759

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Egibacter rhizosphaerae strain EGI 80759 chromosome, complete

Gene Summary

Adenine Count

656717 bp

Thymine Count

657140 bp

Guanine Count

1664033 bp

Cytosine Count

1659279 bp

Genome Length

4637169 bp

Protein-coding Genes

4199 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
plasmid pria4b orf-3 family proteinER308_RS02125Not AvailablePositive453507 - 45494651994.1
swim zinc finger family proteinER308_RS02130Not AvailablePositive454943 - 45671264310.9
type ii toxin-antitoxin system death-on-curing family toxinER308_RS02135Not AvailableNegative456720 - 45709713471.2
ribbon-helix-helix protein, copg familyER308_RS02140Not AvailableNegative457094 - 4572978028.6
phosphotransferase family proteinER308_RS02145Not AvailableNegative457442 - 45845236529.6
gnat family n-acetyltransferaseER308_RS02150Not AvailablePositive458546 - 45891412686.1
carboxymuconolactone decarboxylase family proteinER308_RS02155Not AvailablePositive459184 - 46023936347.9
rna polymerase sigma factor sigjER308_RS02160Not AvailablePositive460236 - 46108730695.3
hypothetical proteinER308_RS02165Not AvailablePositive461227 - 4614969198.71
hypothetical proteinER308_RS02170Not AvailableNegative461591 - 4618007067.95

Displaying genes 421 – 430 of 4250 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.