Egibacter rhizosphaerae strain EGI 80759

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Nitriliruptoria

Order

Egibacterales

Family

Egibacteraceae

Genus

Egibacter

Description

Egibacter rhizosphaerae strain EGI 80759 is characterized by its single replicon, which simplifies its genomic structure and may influence its genetic stability and replication efficiency. The strain is cataloged under the accession number NZ_CP036402.1, indicating its availability in genomic databases for further research and reference. As a member of the Egibacter genus, E. rhizosphaerae is likely to inhabit the rhizosphere, the region of soil influenced by root secretions and associated soil microorganisms. This ecological niche suggests that EGI 80759 may play a role in plant-microbe interactions, potentially contributing to nutrient cycling, plant health, or soil fertility. The presence of such bacteria in the rhizosphere is often associated with beneficial effects on plant growth, which is an essential area of study in agricultural microbiology. The traits of E. rhizosphaerae strain EGI 80759, particularly its genomic structure and ecological niche, provide insights into its potential functions and applications in sustainable agriculture and environmental management. Understanding the role of this strain in the rhizosphere could lead to the development of biofertilizers or biocontrol agents that enhance plant growth and resilience against pathogens.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassNitriliruptoria
OrderEgibacterales
FamilyEgibacteraceae
GenusEgibacter
SpeciesEgibacter rhizosphaerae
Strainstrain EGI 80759

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Egibacter rhizosphaerae strain EGI 80759 chromosome, complete

Gene Summary

Adenine Count

656717 bp

Thymine Count

657140 bp

Guanine Count

1664033 bp

Cytosine Count

1659279 bp

Genome Length

4637169 bp

Protein-coding Genes

4199 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix transcriptional regulatorER308_RS20540Not AvailableNegative4477144 - 447916272221.4
transglycosylase domain-containing proteinER308_RS21900Not AvailablePositive4479342 - 448198493192.7
pup--protein ligaseER308_RS20560Not AvailableNegative4482011 - 448336651814.4
hypothetical proteinER308_RS20565Not AvailablePositive4483479 - 448591184502.8
proteasome subunit alphaER308_RS20570Not AvailableNegative4485938 - 448665426007.5
proteasome subunit betaER308_RS20575Not AvailableNegative4486736 - 448758430586.6
rhodanese-like domain-containing proteinER308_RS20580Not AvailablePositive4487818 - 448842321279.4
gaf and antar domain-containing proteinER308_RS20585Not AvailablePositive4488487 - 448922726912.1
vit1/ccc1 transporter family proteinER308_RS20590Not AvailablePositive4489441 - 449006420605.9
ubiquitin-like protein pupER308_RS20595Not AvailableNegative4490185 - 44903736991.66

Displaying genes 4121 – 4130 of 4250 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.