Egibacter rhizosphaerae strain EGI 80759

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Nitriliruptoria

Order

Egibacterales

Family

Egibacteraceae

Genus

Egibacter

Description

Egibacter rhizosphaerae strain EGI 80759 is characterized by its single replicon, which simplifies its genomic structure and may influence its genetic stability and replication efficiency. The strain is cataloged under the accession number NZ_CP036402.1, indicating its availability in genomic databases for further research and reference. As a member of the Egibacter genus, E. rhizosphaerae is likely to inhabit the rhizosphere, the region of soil influenced by root secretions and associated soil microorganisms. This ecological niche suggests that EGI 80759 may play a role in plant-microbe interactions, potentially contributing to nutrient cycling, plant health, or soil fertility. The presence of such bacteria in the rhizosphere is often associated with beneficial effects on plant growth, which is an essential area of study in agricultural microbiology. The traits of E. rhizosphaerae strain EGI 80759, particularly its genomic structure and ecological niche, provide insights into its potential functions and applications in sustainable agriculture and environmental management. Understanding the role of this strain in the rhizosphere could lead to the development of biofertilizers or biocontrol agents that enhance plant growth and resilience against pathogens.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassNitriliruptoria
OrderEgibacterales
FamilyEgibacteraceae
GenusEgibacter
SpeciesEgibacter rhizosphaerae
Strainstrain EGI 80759

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Egibacter rhizosphaerae strain EGI 80759 chromosome, complete

Gene Summary

Adenine Count

656717 bp

Thymine Count

657140 bp

Guanine Count

1664033 bp

Cytosine Count

1659279 bp

Genome Length

4637169 bp

Protein-coding Genes

4199 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate kinaseER308_RS19430Not AvailablePositive4237357 - 423805523953.2
3-dehydroquinate synthaseER308_RS19435Not AvailablePositive4238052 - 423913737398.0
sensor domain-containing diguanylate cyclaseER308_RS19440Not AvailableNegative4239142 - 424030841301.9
type ii 3-dehydroquinate dehydrataseER308_RS19445Not AvailablePositive4240482 - 424098817533.3
m24 family metallopeptidaseER308_RS19450Not AvailablePositive4240985 - 424217241221.2
elongation factor pER308_RS19455Not AvailablePositive4242208 - 424276520633.3
transcription antitermination factor nusbER308_RS19460Not AvailablePositive4242769 - 424316714400.8
alpha/beta fold hydrolaseER308_RS19465Not AvailablePositive4243391 - 424612391499.6
hnh endonucleaseER308_RS19470Not AvailablePositive4246479 - 424847370639.9
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrrER308_RS19475Not AvailablePositive4248635 - 424919820171.1

Displaying genes 3901 – 3910 of 4250 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.