Egibacter rhizosphaerae strain EGI 80759

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Nitriliruptoria

Order

Egibacterales

Family

Egibacteraceae

Genus

Egibacter

Description

Egibacter rhizosphaerae strain EGI 80759 is characterized by its single replicon, which simplifies its genomic structure and may influence its genetic stability and replication efficiency. The strain is cataloged under the accession number NZ_CP036402.1, indicating its availability in genomic databases for further research and reference. As a member of the Egibacter genus, E. rhizosphaerae is likely to inhabit the rhizosphere, the region of soil influenced by root secretions and associated soil microorganisms. This ecological niche suggests that EGI 80759 may play a role in plant-microbe interactions, potentially contributing to nutrient cycling, plant health, or soil fertility. The presence of such bacteria in the rhizosphere is often associated with beneficial effects on plant growth, which is an essential area of study in agricultural microbiology. The traits of E. rhizosphaerae strain EGI 80759, particularly its genomic structure and ecological niche, provide insights into its potential functions and applications in sustainable agriculture and environmental management. Understanding the role of this strain in the rhizosphere could lead to the development of biofertilizers or biocontrol agents that enhance plant growth and resilience against pathogens.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassNitriliruptoria
OrderEgibacterales
FamilyEgibacteraceae
GenusEgibacter
SpeciesEgibacter rhizosphaerae
Strainstrain EGI 80759

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Egibacter rhizosphaerae strain EGI 80759 chromosome, complete

Gene Summary

Adenine Count

656717 bp

Thymine Count

657140 bp

Guanine Count

1664033 bp

Cytosine Count

1659279 bp

Genome Length

4637169 bp

Protein-coding Genes

4199 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipopolysaccharide biosynthesis proteinER308_RS12470Not AvailablePositive2670162 - 267160151312.7
sugar transferaseER308_RS12480Not AvailableNegative2672497 - 267424262862.8
dtdp-4-dehydrorhamnose 3,5-epimerase family proteinER308_RS12485Not AvailableNegative2674800 - 267532719923.4
dtdp-4-dehydrorhamnose reductaseER308_RS12490Not AvailableNegative2675327 - 267617530431.6
dtdp-glucose 4,6-dehydrataseER308_RS12495Not AvailableNegative2676175 - 267716135692.5
hypothetical proteinER308_RS12500Not AvailablePositive2677449 - 267786515560.9
httm domain-containing proteinER308_RS12505Not AvailablePositive2677903 - 267897938665.6
hypothetical proteinER308_RS12510Not AvailableNegative2679066 - 267991130569.1
nad-dependent epimerase/dehydratase family proteinER308_RS12515Not AvailablePositive2680045 - 268099233675.6
type ii toxin-antitoxin system vapc family toxinER308_RS21665Not AvailablePositive2681049 - 26811985073.06

Displaying genes 2501 – 2510 of 4250 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.