Egibacter rhizosphaerae strain EGI 80759

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Nitriliruptoria

Order

Egibacterales

Family

Egibacteraceae

Genus

Egibacter

Description

Egibacter rhizosphaerae strain EGI 80759 is characterized by its single replicon, which simplifies its genomic structure and may influence its genetic stability and replication efficiency. The strain is cataloged under the accession number NZ_CP036402.1, indicating its availability in genomic databases for further research and reference. As a member of the Egibacter genus, E. rhizosphaerae is likely to inhabit the rhizosphere, the region of soil influenced by root secretions and associated soil microorganisms. This ecological niche suggests that EGI 80759 may play a role in plant-microbe interactions, potentially contributing to nutrient cycling, plant health, or soil fertility. The presence of such bacteria in the rhizosphere is often associated with beneficial effects on plant growth, which is an essential area of study in agricultural microbiology. The traits of E. rhizosphaerae strain EGI 80759, particularly its genomic structure and ecological niche, provide insights into its potential functions and applications in sustainable agriculture and environmental management. Understanding the role of this strain in the rhizosphere could lead to the development of biofertilizers or biocontrol agents that enhance plant growth and resilience against pathogens.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassNitriliruptoria
OrderEgibacterales
FamilyEgibacteraceae
GenusEgibacter
SpeciesEgibacter rhizosphaerae
Strainstrain EGI 80759

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Egibacter rhizosphaerae strain EGI 80759 chromosome, complete

Gene Summary

Adenine Count

656717 bp

Thymine Count

657140 bp

Guanine Count

1664033 bp

Cytosine Count

1659279 bp

Genome Length

4637169 bp

Protein-coding Genes

4199 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-oxoglutarate dehydrogenase, e2 component, dihydrolipoamide succinyltransferaseER308_RS00655Not AvailablePositive156978 - 15866959373.7
lipoyl(octanoyl) transferase lipbER308_RS00660Not AvailablePositive158718 - 15940724782.6
lipoyl synthaseER308_RS00665Not AvailablePositive159494 - 16045635779.6
mechanosensitive ion channel family proteinER308_RS00670Not AvailablePositive160565 - 16170741207.6
type i glutamate--ammonia ligaseER308_RS00675Not AvailablePositive161884 - 16330253277.6
hypothetical proteinER308_RS00680Not AvailablePositive163532 - 16395714577.1
gamma-glutamyltransferase family proteinER308_RS00685Not AvailableNegative164069 - 16581761881.1
capa family proteinER308_RS00690Not AvailableNegative165814 - 16696241176.0
poly-gamma-glutamate biosynthesis protein pgscER308_RS00695Not AvailableNegative167023 - 16747816439.0
poly-gamma-glutamate synthase pgsbER308_RS00700Not AvailableNegative167479 - 16870242846.5

Displaying genes 131 – 140 of 4250 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.