Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidase | EYR26_RS04255 | Not Available | Positive | 876823 - 877077 | 9040.56 |
| gh12 family glycosyl hydrolase domain-containing protein | EYR26_RS04265 | Not Available | Positive | 877498 - 878244 | 26185.5 |
| Ncrna_class:other | Not Available | Not Available | Positive | 878638 - 878714 | Not Available |
| rhamnogalacturonan lyase b n-terminal domain-containing protein | EYR26_RS04275 | B0YEH9 | Negative | 878860 - 880461 | 57091.4 |
| hypothetical protein | EYR26_RS04280 | Not Available | Negative | 880833 - 881159 | 12010.8 |
| amidohydrolase family protein | EYR26_RS04285 | Not Available | Negative | 881463 - 882743 | 45086.4 |
| amidohydrolase | EYR26_RS04290 | A0A0F7GG06 | Negative | 882740 - 884149 | 50097.4 |
| duf924 family protein | EYR26_RS04295 | Not Available | Positive | 884289 - 884849 | 20813.3 |
| is1595 family transposase | EYR26_RS04300 | Not Available | Positive | 884972 - 885937 | 35920.2 |
| macro domain-containing protein | EYR26_RS04305 | B7UP19 | Negative | 886022 - 887092 | 40184.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

