Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspm | EYR26_RS04145 | P29039 | Positive | 854378 - 855031 | 23816.6 |
| type ii secretion system protein xpsn | EYR26_RS04150 | P29040 | Positive | 855021 - 855821 | 28278.7 |
| type ii secretion system secretin gspd | EYR26_RS04155 | P29041 | Positive | 855818 - 858124 | 79867.8 |
| glycosyltransferase family 2 protein | EYR26_RS04160 | Not Available | Positive | 858121 - 858960 | 29662.5 |
| Ncrna_class:other | Not Available | Not Available | Positive | 859021 - 859100 | Not Available |
| utra domain-containing protein | EYR26_RS04170 | P96061 | Negative | 859353 - 860081 | 26990.3 |
| nicotinamide riboside transporter pnuc | EYR26_RS04175 | Not Available | Negative | 860187 - 860762 | 21665.7 |
| tonb-dependent receptor | EYR26_RS04180 | Q05202 | Negative | 861137 - 863299 | 79079.7 |
| phosphotransferase enzyme family protein | EYR26_RS04185 | Not Available | Negative | 863335 - 864492 | 42452.3 |
| glycosyltransferase family 2 protein | EYR26_RS04195 | Not Available | Positive | 865103 - 865942 | 30894.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

