Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diffusible signal factor-reguated s8 family serine peptidase | EYR26_RS04095 | Not Available | Positive | 845032 - 846915 | 63467.0 |
| type ii secretion system atpase gspe | EYR26_RS04100 | P31742 | Positive | 847045 - 848772 | 64061.6 |
| hypothetical protein | EYR26_RS04105 | Not Available | Positive | 848796 - 848948 | 5148.23 |
| type ii secretion system protein xpsf | EYR26_RS04110 | P31744 | Positive | 848948 - 850165 | 44208.4 |
| type ii secretion system major pseudopilin gspg | EYR26_RS04115 | P31734 | Positive | 850433 - 850864 | 15149.2 |
| type ii secretion system protein xpsh | EYR26_RS04120 | P31736 | Positive | 850874 - 851383 | 18120.0 |
| type ii secretion system protein xpsi | EYR26_RS04125 | P31738 | Positive | 851380 - 851796 | 15289.5 |
| type ii secretion system protein j | EYR26_RS04130 | P31740 | Positive | 851793 - 852428 | 23156.0 |
| general secretion pathway protein gspk | EYR26_RS04135 | P34026 | Positive | 852425 - 853276 | 30253.9 |
| piln domain-containing protein | EYR26_RS04140 | P34027 | Positive | 853273 - 854394 | 41533.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

