Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-diacylglycerol--serine o-phosphatidyltransferase | EYR26_RS03985 | Q9ZM68 | Positive | 812488 - 813261 | 28148.7 |
| alanine acetyltransferase | EYR26_RS03990 | Not Available | Positive | 813296 - 813739 | 15793.0 |
| ribosomal protein s18-alanine n-acetyltransferase | EYR26_RS03995 | Not Available | Positive | 813736 - 814218 | 17822.4 |
| polysaccharide lyase family 1 protein | EYR26_RS04000 | Q56806 | Positive | 815369 - 816502 | 40410.1 |
| transglycosylase slt domain-containing protein | EYR26_RS04005 | Not Available | Negative | 816770 - 818743 | 72108.3 |
| dipeptidase | EYR26_RS04010 | Not Available | Positive | 819035 - 819398 | 13095.6 |
| valine--trna ligase | EYR26_RS04015 | B2SPF0 | Negative | 819466 - 822408 | 111041.0 |
| duf4276 family protein | EYR26_RS04020 | Not Available | Negative | 822534 - 823187 | 23780.9 |
| aaa family atpase | EYR26_RS04025 | Not Available | Negative | 823190 - 824422 | 46526.3 |
| dna polymerase iii subunit chi | EYR26_RS04030 | Not Available | Negative | 824432 - 824857 | 15905.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

