Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein subunit beta/fixa family protein | EYR26_RS03885 | P53575 | Negative | 790523 - 791269 | 26485.2 |
| dtdp-glucose 4,6-dehydratase | EYR26_RS03890 | B0RVL0 | Positive | 791495 - 792550 | 38421.3 |
| glucose-1-phosphate thymidylyltransferase rfba | EYR26_RS03895 | B0RVK9 | Positive | 792606 - 793493 | 32652.0 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | EYR26_RS03900 | O27818 | Positive | 793490 - 794047 | 20486.3 |
| dtdp-4-dehydrorhamnose reductase | EYR26_RS03905 | Q2SYI1 | Positive | 794044 - 794952 | 32384.2 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | EYR26_RS03910 | P0C7J3 | Negative | 795069 - 796472 | 51091.6 |
| phosphomannomutase/phosphoglucomutase | EYR26_RS03915 | P0C7J2 | Negative | 796517 - 797863 | 49030.2 |
| coa transferase subunit a | EYR26_RS03920 | P0C7I7 | Positive | 797997 - 798728 | 25913.9 |
| coa transferase subunit b | EYR26_RS03925 | B0RVK3 | Positive | 798728 - 799357 | 22123.7 |
| glycoside hydrolase family 99-like domain-containing protein | EYR26_RS03930 | B0RVK2 | Negative | 799415 - 801502 | 78933.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

