Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidase | EYR26_RS03410 | Not Available | Negative | 697215 - 698354 | 40374.6 |
| hypothetical protein | EYR26_RS03415 | Not Available | Negative | 698389 - 698697 | 10630.6 |
| yajq family cyclic di-gmp-binding protein | EYR26_RS03420 | Q2P7S5 | Negative | 698954 - 699439 | 18233.9 |
| dmt family transporter | EYR26_RS03425 | Q9ZJZ2 | Positive | 699547 - 700443 | 31785.2 |
| methionine abc transporter atp-binding protein | EYR26_RS03430 | Q2P7S3 | Positive | 700563 - 701570 | 36376.1 |
| methionine abc transporter permease | EYR26_RS03435 | O32168 | Positive | 701567 - 702262 | 24289.9 |
| metq/nlpa family abc transporter substrate-binding protein | EYR26_RS03440 | Q9CK95 | Positive | 702357 - 703163 | 28999.7 |
| xopak family type iii secretion system effector | EYR26_RS24670 | Not Available | Negative | 703198 - 704235 | 36859.0 |
| hypothetical protein | EYR26_RS03455 | Not Available | Positive | 704453 - 704995 | 19923.1 |
| ompw family protein | EYR26_RS03460 | Not Available | Negative | 705280 - 705966 | 23736.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

