Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xopa/hpa1 family type iii secretion system protein | EYR26_RS02860 | Not Available | Negative | 582584 - 583009 | 13807.5 |
| lytic transglycosylase domain-containing protein | EYR26_RS02865 | Q07568 | Positive | 583385 - 583948 | 20939.0 |
| hypothetical protein | EYR26_RS02870 | Not Available | Negative | 584412 - 585965 | 55014.4 |
| Ncrna_class:other | Not Available | Not Available | Positive | 587202 - 587278 | Not Available |
| hpf/raia family ribosome-associated protein | EYR26_RS02880 | Not Available | Negative | 587550 - 587891 | 11959.0 |
| duf3772 domain-containing protein | EYR26_RS02885 | P39285 | Positive | 588244 - 590634 | 85231.8 |
| hypothetical protein | EYR26_RS02890 | Not Available | Negative | 590653 - 590913 | 9727.71 |
| hypothetical protein | EYR26_RS24170 | Not Available | Negative | 591131 - 591337 | 7680.79 |
| aarf/abc1/ubib kinase family protein | EYR26_RS02900 | P73577 | Negative | 591541 - 593448 | 69917.9 |
| duf808 domain-containing protein | EYR26_RS02910 | P46125 | Positive | 593506 - 594447 | 32671.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

